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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837672.1_cds_XP_016506693.1_19894
CDS Infomation

[gene=LOC107824450] [db_xref=GeneID:107824450] [protein=3-hydroxyisobutyryl-CoA hydrolase-like protein 5 isoform X2] [protein_id=XP_016506693.1] [location=join(8406..8438,9342..9425,9536..9604,10459..10522,10618..10691,10904..10987,11081..11165,12290..12375,12910..13031,13120..13180,13726..13824,14021..14122,14228..14269,15020..15126,15217..15331)] [gbkey=CDS]
Sequence

ATGGCTCAAGCAATGCTAAAACCAAATCAAGAGGTTGTTATTGCTGAGGAAGTTGGTCGT
GTTAGAGTGCTCACTTTAAATAGTCCTAACCAATTAAATGTCATCTCTATAAAAGTGGCA
TTGGTACTAGGACAAAAACTCGAGAAAATTGAGAAAGATGACAATGCACAACTTGTTATC
ATCAAGGGAGTCGGCCGAGCTTTATCTGTTGGTGGGAACTTGAAACATATTTATGATGGC
AGAAAGACAAGGGATTCTTGCATTGAAGGTATTTATAGAATGCATTGGCTTTGCTACCAC
ATTCATACATACAAGAAACCACAGGTTGCTCTTGTTCATGGAATGTGTATGGGGGGAGGT
GGATCTTTAATGGTGCCAATGAAGTTCTCTGTTGTCACTGAAAAATCATATTTTTCGACT
CCTGAAACAAGATTTGGATACCATCCAGACTGTGGCTTCTCATATATGCTTTCACGACTT
CCTGGTCGACTTGGAGAATACTTGGGCTTAACAGGTGCAAAGCTGAAGGGTAAAGAAATT
GTTGCTGCTGGACTTGCCACTCATTTTGTTCCTTTTGATAAATTGGTTTGCTTGGAGAAG
AGCTTGTTGAGCTTAACAACTGGAGAAGAGAAGGCTATCAGATCAGCCATTCAAGAATTC
TCAACTGAAGTTGAGATAGATGAAAGAAGTATCTTGAACAAGCTTTCCATAATCAATGAG
TGCTTTTCCAAGGATTCCATGGAGGACATTATGAAATCACTTGAAGTTGAAGCAAGGAAG
GTAGGAAATGATTGGATTGTAGCAGTGCTCGGAAGCCTAAAAAGATCATCCCCAACCGGA
TTGAAAATAACACTCAGATCGATTCGAGAAGGAAGAAAACTAACATTGTCTGAATGCCTC
AAGCAAGAATTTAGACTTTCAATAAACATATTCGGAACAATCATATCTAGCGATATCTAT
GAGGGCATACGGGCTATCACAATTGACAAGGATAATTCTCCAAAGTGGTACCTTCCAACT
CTTGAGAAGGTGAAAGATGAGCAACTCAACATGATTTTCAAGCCATTTGAAGAACATTTG
GAGCTCCAAATTCCAGACAAAGAAGAGTTCAGGTGGGATGGAAAATATGAAAATTCAGTA
TATTATCAACTTAACCAAGAGAGGAATCAAAGAGGAATATCCCAATCAATTGCTCTTGGA
ACTGATCGTAAACAATCTGCATTATGA

Peptide Sequence

PEP ID

XP_016506693.1
PEP Infomation

PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 isoform X2 [Nicotiana tabacum]
Sequence

MAQAMLKPNQEVVIAEEVGRVRVLTLNSPNQLNVISIKVALVLGQKLEKIEKDDNAQLVI
IKGVGRALSVGGNLKHIYDGRKTRDSCIEGIYRMHWLCYHIHTYKKPQVALVHGMCMGGG
GSLMVPMKFSVVTEKSYFSTPETRFGYHPDCGFSYMLSRLPGRLGEYLGLTGAKLKGKEI
VAAGLATHFVPFDKLVCLEKSLLSLTTGEEKAIRSAIQEFSTEVEIDERSILNKLSIINE
CFSKDSMEDIMKSLEVEARKVGNDWIVAVLGSLKRSSPTGLKITLRSIREGRKLTLSECL
KQEFRLSINIFGTIISSDIYEGIRAITIDKDNSPKWYLPTLEKVKDEQLNMIFKPFEEHL
ELQIPDKEEFRWDGKYENSVYYQLNQERNQRGISQSIALGTDRKQSAL

Transcript Sequence

Gene sequence data has not been registered.